Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/ef4f7bb96f8568e1f4752e8fc757bf508300ba00content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: ef4f7bb96f8568e1f4752e8fc757bf508300ba00
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell TGTGAAACACTGGCCA-1, CATGCATAGCTGTCAG-1, CCATAAATCTTGTTCG-1, ATTGAAGCAGCCAGAA-1, GGTGAGCCACGTGCTG-1 (top 5 of 3597 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
ef4f7bb96f8568e1f4752e8fc757bf508300ba00.gz 1.82 GB 2b3da917045408b33a3922a885dfcbe3
ef4f7bb96f8568e1f4752e8fc757bf508300ba00.gz.tbi 1014.59 KB b271c497c188c146c8e1088e92d2d071
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB c8e8635b5b7d21406a8c83e3978300b6
statistics/