Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/f008f9c799f3d5584b644a584b8c9941f40fc570content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: f008f9c799f3d5584b644a584b8c9941f40fc570
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell TTACCGTGTTGAGCCG-1, ACACTTAAGGAATAAC-1, GTCATGCCAGCATGTC-1, GTGCTCAAGAGGAAGG-1, CGCTCAGCATGATTGT-1 (top 5 of 7921 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
f008f9c799f3d5584b644a584b8c9941f40fc570.gz 2.33 GB 5359f2bf1bb1b48160dd9e76bdaff2f8
f008f9c799f3d5584b644a584b8c9941f40fc570.gz.tbi 1.12 MB 975cf13c438a4071e0518466c397abc1
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 6a1fb8b48a4be3babcc136d0855d3e3e
statistics/