Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/f385e9bc96bd6076a5446499378c7bc7d35d8699content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: f385e9bc96bd6076a5446499378c7bc7d35d8699
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell TGTGTGAGTTAACGAT-1, TCAGTAGGTAATCCCT-1, CTTTGGGAGTAGCGGG-1, AACTTAGTCTGCAACG-1, GACATAGAGCACGTTG-1 (top 5 of 6164 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
f385e9bc96bd6076a5446499378c7bc7d35d8699.gz 3.96 GB 784332018bb31964b1ea424dd1c8aa1d
f385e9bc96bd6076a5446499378c7bc7d35d8699.gz.tbi 1.51 MB 5226fcbb6f3a5232b20935381b392402
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 2e0570804ba94931657d400336bc77ad
statistics/