Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/f3ae4126f1b0cf2be1d2d8458c2d37249658b768content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: f3ae4126f1b0cf2be1d2d8458c2d37249658b768
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell CCACAATAGGACCGCT-1, GGCTTCAAGGTCGATT-1, GGTTGCGGTGTGCACG-1, GCGTAACGTTTGGCGG-1, CGCTGTGCACTTCACT-1 (top 5 of 4753 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
f3ae4126f1b0cf2be1d2d8458c2d37249658b768.gz 1.66 GB 0a38b55213555c7a5df0f9aff243ea53
f3ae4126f1b0cf2be1d2d8458c2d37249658b768.gz.tbi 971.0 KB 4ce1149b980fed63980fe2d222bd10f7
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB dcf2580ac40cb1daa1ca50d7ed5ba6d3
statistics/