Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/f3f736be436e2e9c6c30fbffc89e6fb99ca08a20content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: f3f736be436e2e9c6c30fbffc89e6fb99ca08a20
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell GTTGCGGGTGAATCGC-1, CGGTTCCGTCACAGCG-1, ATCAATCCAGTTAAAG-1, ATGTCATCAATTTAGC-1, CGGGACAAGATAACCC-1 (top 5 of 4191 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
f3f736be436e2e9c6c30fbffc89e6fb99ca08a20.gz 1.33 GB 4b2dfa5c645d0035e0604db70c46387a
f3f736be436e2e9c6c30fbffc89e6fb99ca08a20.gz.tbi 881.13 KB 69961f2699f79f74be573026a09ee372
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 9254019ae8da96dd437443c782142a2f
statistics/