Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/f8d18f6777f78f41926d7df81d871467d9d262a7content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: f8d18f6777f78f41926d7df81d871467d9d262a7
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell GCTCTGGCACATGCTA-1, TCAAGAACAATATGGA-1, CGTGGTTCATAGCGAG-1, ACTTATCTCGGCCAGT-1, CCGCAAGGTCACCTAT-1 (top 5 of 238 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
f8d18f6777f78f41926d7df81d871467d9d262a7.gz 193.88 MB 54806e9ce4b9c83d8f34938b715439d5
f8d18f6777f78f41926d7df81d871467d9d262a7.gz.tbi 548.16 KB 3f3c9c8010f6529e23ccd34564158e27
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 86be108181f2775d67d75b88ce78fce2
statistics/