Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/f8ecabad76cba4ea3f27a3ad40407e5901031b6econtent_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: f8ecabad76cba4ea3f27a3ad40407e5901031b6e
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell GTAAGGTCAGCTTAAT-1, TCCACAACAAAGGTAC-1, AAGCGCTGTGCTGTAA-1, AGGTTACTCCCGTTAC-1, CTATGAGGTGATGGCT-1 (top 5 of 9785 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
f8ecabad76cba4ea3f27a3ad40407e5901031b6e.gz 3.11 GB 700eeac57c709e1f8332e51949dd31dc
f8ecabad76cba4ea3f27a3ad40407e5901031b6e.gz.tbi 1.31 MB 95cfb68f8ce0f2f172df6920d905a180
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB e1f77881a77d13361772205f61a99b3e
statistics/