Resource

Id summary/johansen2025Crossspecies/atac_fragments/marmoset/P0009_1content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: P0009_1
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Marmoset/genome/calJac240_pri
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: marmoset
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell ATGGTGCGTTGGCGTG-P0009_1, GGTAAGGGTTAATGCG-P0009_1, ACGAAGTCAGGAATCG-P0009_1, TCGCATTGTGTCCTGC-P0009_1, CTGGTTACAAACTAAG-P0009_1 (top 5 of 4785 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
P0009_1.gz 1.76 GB 1435d7129d9cd71e39bf70d6f87b7a9c
P0009_1.gz.tbi 998.95 KB 6d3c82d6bad63b0416fd42d6aa2f1512
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.3 KB f1b851f8f01c7ceaca5554f733d9a33e
statistics/