Resource

Id summary/johansen2025Crossspecies/atac_fragments/marmoset/P0011_1content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: P0011_1
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Marmoset/genome/calJac240_pri
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: marmoset
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell GATAATCGTATTACCC-P0011_1, GCATGAAAGGGCCACT-P0011_1, CAAGTATGTAGCTGGT-P0011_1, AGTAACCTCGCTATAA-P0011_1, ACTATCCGTCATGCAA-P0011_1 (top 5 of 4437 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
P0011_1.gz 1.81 GB 6249c5337232a57eab53f8b56cd9c7cf
P0011_1.gz.tbi 1000.66 KB eb923a5e1b69673f44066140e29949b4
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.3 KB 377d29af917efcab967e72158d8a1d8d
statistics/