Resource

Id summary/johansen2025Crossspecies/atac_fragments/marmoset/P0014_1content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: P0014_1
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Marmoset/genome/calJac240_pri
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: marmoset
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell CGCTAACCAGGTTATT-P0014_1, AACAGGATCCTAATTC-P0014_1, TGTTGCACATTATGCG-P0014_1, TAGCGGCTCCACCTTA-P0014_1, ATGTGAGAGAAGCTAG-P0014_1 (top 5 of 2924 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
P0014_1.gz 1.27 GB 894777d1cb18d2edeeb3a8c716d4abf8
P0014_1.gz.tbi 865.32 KB 30948aae1e9d9a8cf4c8776f0a33ee32
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.3 KB 2c278b7b31c9078d46163ead77f686bc
statistics/