Resource

Id summary/johansen2025Crossspecies/atac_fragments/marmoset/P0014_2content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: P0014_2
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Marmoset/genome/calJac240_pri
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: marmoset
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell ACCTGGTCATTAGGCC-P0014_2, ATTGGTTCAGGATGGC-P0014_2, CTAAATGTCTAAGTCA-P0014_2, TATCGAGGTAGGTTAT-P0014_2, GGAACCTGTAGTTAAC-P0014_2 (top 5 of 2407 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
P0014_2.gz 1.18 GB b18cf259dfb774e584527b8b9136a455
P0014_2.gz.tbi 835.21 KB 1a9aed366d5a99c7fab1d26dfd014eda
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.3 KB 34fc2a69ea3a729b401b3d4bd3ea4aab
statistics/