Resource

Id summary/johansen2025Crossspecies/atac_fragments/marmoset/P0018_1content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: P0018_1
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Marmoset/genome/calJac240_pri
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: marmoset
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell TGAAGTGAGTTCCTGC-P0018_1, CACCTGTTCAGGATGA-P0018_1, AGTGATGAGCCTGTGA-P0018_1, ATGACCAGTCCGCTGT-P0018_1, AGTTGCGTCTCCATAT-P0018_1 (top 5 of 4319 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
P0018_1.gz 1.84 GB 675d8ff94f229ccbb5f6959224c9035e
P0018_1.gz.tbi 997.38 KB e5574d6ec83666c341ae279fd277e0ae
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.3 KB ec4c9844c31e193cb727536b69bc68fc
statistics/