Resource

Id summary/johansen2025Crossspecies/atac_fragments/marmoset/P0018_2content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: P0018_2
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Marmoset/genome/calJac240_pri
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: marmoset
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell CCACAGGGTTAACGAT-P0018_2, TCCTCTAAGTAACTCA-P0018_2, ATTAGCGGTGTAACCA-P0018_2, AGGTGAATCGAAGTGA-P0018_2, AGGTTAGAGGTCGATT-P0018_2 (top 5 of 5003 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
P0018_2.gz 1.88 GB 61e0d9e3f8e54a2a735fbd48d58319ea
P0018_2.gz.tbi 1007.17 KB 5ff5d186a0b63e6b2d96afa08e147663
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.3 KB 776f72e66fa5bf35ff65d99126523b59
statistics/