Resource

Id summary/johansen2025Crossspecies/atac_fragments/marmoset/P0021_2content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: P0021_2
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Marmoset/genome/calJac240_pri
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: marmoset
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell GGTTGCATCATTAGTG-P0021_2, GTGGCTTCATGAATCT-P0021_2, CTCATGACATAATCGT-P0021_2, GTGCGGTTCCTCGATC-P0021_2, ACGACAAAGCTAATCA-P0021_2 (top 5 of 4730 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
P0021_2.gz 1.87 GB cb3d6c5ef5b519ed9bd3ae8212bab989
P0021_2.gz.tbi 1.0 MB 7587035a34013b6d9e9260edb0f60793
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.3 KB 73573a67a8588dcfb2ef02c9133253b2
statistics/