Resource

Id summary/johansen2025Crossspecies/atac_fragments/marmoset/P0021_4content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: P0021_4
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Marmoset/genome/calJac240_pri
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: marmoset
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell GAGGAGGCAAGGTCCT-P0021_4, TAGTTTGAGGTTACAC-P0021_4, CGTAACTAGACAACAG-P0021_4, AAGTGTTGTACCGAAC-P0021_4, AATCCATCATAGCTTG-P0021_4 (top 5 of 4883 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
P0021_4.gz 1.03 GB e177e4b3f6f04dd7b4d5e8f543be6234
P0021_4.gz.tbi 790.37 KB 11b56e63dee52f7ef35f37482ca76599
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.3 KB 0be48a20d943516c045c54cb4353f07c
statistics/