Resource

Id summary/johansen2025Crossspecies/atac_fragments/marmoset/P0022_1content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: P0022_1
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Marmoset/genome/calJac240_pri
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: marmoset
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell TGTGGAGCATTGACAT-P0022_1, TCAGTAATCCTACCTA-P0022_1, TGTAACTCACAACAAA-P0022_1, CAGCCTAAGATGCCTG-P0022_1, GTTTATCTCAGGCTAT-P0022_1 (top 5 of 1606 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
P0022_1.gz 800.82 MB 4685ee042b4be2eca5eed2edd075869b
P0022_1.gz.tbi 702.8 KB 744890819057d037835f27c397b1cf03
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.3 KB a35e87218b386ef56ff1d8770c441fcc
statistics/