Resource

Id summary/johansen2025Crossspecies/atac_fragments/marmoset/P0022_2content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: P0022_2
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Marmoset/genome/calJac240_pri
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: marmoset
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell ATATGCTCACCTCACC-P0022_2, TAATCCGCACGTAATT-P0022_2, GTCTAACAGAGGCTAA-P0022_2, TTGTTGTTCGGTACGC-P0022_2, TGTGGCTCACTGACCG-P0022_2 (top 5 of 2554 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
P0022_2.gz 1.24 GB cd7343ab17080b1588dbd3b4289c3032
P0022_2.gz.tbi 840.47 KB 0768f52208437a12997f8ec65c3c7ec1
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.3 KB 1624b8722721b72c0a6b0a4d55961591
statistics/