Resource

Id summary/johansen2025Crossspecies/atac_fragments/marmoset/P0022_4content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: P0022_4
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Marmoset/genome/calJac240_pri
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: marmoset
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell GCCTGACAGACTTACA-P0022_4, AGCTACGTCATTATGG-P0022_4, TTCAGGTAGGTAGCTT-P0022_4, CCCGCAACAGGTCCTG-P0022_4, CCTCCTCTCGCTTGCT-P0022_4 (top 5 of 4829 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
P0022_4.gz 1.36 GB 3f163127ae013c4405c06b8acdfada20
P0022_4.gz.tbi 863.4 KB ca463abe743b8b89ca190fef89994acb
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.3 KB 17bb95bbf566953b492a49eb8353ee50
statistics/