Resource

Id summary/johansen2025Crossspecies/atac_fragments/marmoset/P0023_2content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: P0023_2
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Marmoset/genome/calJac240_pri
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: marmoset
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell TAGCGGACAGCAGGTA-P0023_2, TGCTGGATCCGGTATG-P0023_2, TTCGGTACAACGTGCT-P0023_2, TAGACCAGTTTAGTCC-P0023_2, CAACAATGTTAATGAC-P0023_2 (top 5 of 3359 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
P0023_2.gz 1.49 GB 3bb93b536f8cbc9a42b874b567174991
P0023_2.gz.tbi 900.51 KB 9ad0bb7ce839a9f08dcdb5e7dd3527c9
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.3 KB 1afee9e575089fd6c9f160e6b2ef3c20
statistics/