Resource

Id summary/johansen2025Crossspecies/atac_fragments/marmoset/P0025_2.h5adcontent_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: P0025_2.h5ad
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Marmoset/genome/calJac240_pri
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: marmoset
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell AATTCGTCACCAGCAT-P0025_2, AGCAATTGTCCCGGAA-P0025_2, TGTGCTGAGTGAACGA-P0025_2, TGAGAACCATCGTTCT-P0025_2, AGCGGATAGGTGAAGC-P0025_2 (top 5 of 4833 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
P0025_2.h5ad.gz 1.05 GB d2b438d58de04386c2650aba96f0f8b7
P0025_2.h5ad.gz.tbi 780.16 KB b0dfbe64c279872496dcbc40e62aaa40
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.32 KB ab87d5f6808e19f537926e70949d6be1
statistics/