Resource

Id summary/johansen2025Crossspecies/atac_fragments/marmoset/P0030_1content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: P0030_1
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Marmoset/genome/calJac240_pri
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: marmoset
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell GTCTTTAGTCATGCCC-P0030_1, CCGTTATGTTGGATCA-P0030_1, TTGTGTGCAGCATGGA-P0030_1, GATGACTTCACCGGTA-P0030_1, CTCGCTAGTGTTTGCT-P0030_1 (top 5 of 5129 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
P0030_1.gz 1.47 GB d18791c48470340727199bef41bd6a81
P0030_1.gz.tbi 909.56 KB d816c867324e31fd247c41ea2b8a0887
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.3 KB d1591ba84df52d385270323de555d9eb
statistics/