Resource

Id summary/johansen2025Crossspecies/atac_fragments/marmoset/P0031_1content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: P0031_1
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Marmoset/genome/calJac240_pri
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: marmoset
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell GTACTTAAGCTATATG-P0031_1, ACCAAGCGTCAGTAAT-P0031_1, ACCTACCTCATCAGTA-P0031_1, TCCCTCACAAACAACA-P0031_1, CGCTTCTAGCTTAGTA-P0031_1 (top 5 of 1903 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
P0031_1.gz 473.55 MB 5f7dcc1a560d0b14e8d869d81334fab3
P0031_1.gz.tbi 605.57 KB d6c528061088ffb9995e506ad4cefa4b
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.3 KB c1a13768d014b25f7538538c76c9bf84
statistics/