Resource

Id summary/johansen2025Crossspecies/atac_fragments/marmoset/P0032_1content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: P0032_1
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Marmoset/genome/calJac240_pri
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: marmoset
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell GTGTTCCTCTCTAGCC-P0032_1, ACTATCCGTCTCAGCC-P0032_1, AATCTCAAGGTCTTGG-P0032_1, AATTGGGAGGCCAATT-P0032_1, CGGAATCGTCGTAATG-P0032_1 (top 5 of 2588 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
P0032_1.gz 685.13 MB 5bef8242fb02b321138dfffea8201b86
P0032_1.gz.tbi 663.61 KB 180a7bc9e233cd43f75e532a42cfe385
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.3 KB f180c9c4d0c39c39e51c974b35948381
statistics/