Resource

Id summary/johansen2025Crossspecies/atac_fragments/marmoset/P0034_1content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: P0034_1
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Marmoset/genome/calJac240_pri
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: marmoset
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell GCCTTACTCTTGCTAT-P0034_1, GCTAAGAAGGAGGCAT-P0034_1, CTGGTTACAGTATGTT-P0034_1, TACGCACCAAACCCTA-P0034_1, TCATTGTTCATCAGTA-P0034_1 (top 5 of 2109 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
P0034_1.gz 936.28 MB 60fa39c5ee45dde9233dca1a4eedc0a2
P0034_1.gz.tbi 744.95 KB f16e592ac4e7afe42875ee6f3a7aea79
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.3 KB 75d3d8f273b03933e9207f5e15a5dc69
statistics/