Resource

Id summary/johansen2025Crossspecies/atac_fragments/marmoset/P0037_1content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: P0037_1
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Marmoset/genome/calJac240_pri
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: marmoset
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell GGGCAATAGAAGGTGC-P0037_1, ATCGGCCAGGCTGGCT-P0037_1, TAAGGACCAATACTGT-P0037_1, TACTTGTTCGCTAGTG-P0037_1, CTTGCTCAGTGACCTG-P0037_1 (top 5 of 13053 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
P0037_1.gz 1.63 GB 8a5c4bb33a46b2c2e8fce02478c539ed
P0037_1.gz.tbi 948.97 KB 4b8fe7b253454295d573d2dd61559f6c
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.3 KB 3a8d926b5e1b401114d48bc577bb86a7
statistics/