Resource

Id summary/johansen2025Crossspecies/atac_fragments/marmoset/P0038_1content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: P0038_1
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Marmoset/genome/calJac240_pri
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: marmoset
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell GATGCTTAGTTTGCGG-P0038_1, TGCGGTTCAGCATGTC-P0038_1, CTGTACCTCCTTAGGG-P0038_1, ATGTTCAAGTACTGGT-P0038_1, AGCGCCTAGACTATTG-P0038_1 (top 5 of 3448 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
P0038_1.gz 1.74 GB d58c4329e22fb341c965ad81ae14094e
P0038_1.gz.tbi 998.9 KB 9bd0e2a3c428a3ea545692c7f6ac1c15
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.3 KB 56d32c70087447898f2ad87be32b02c1
statistics/