Resource

Id summary/johansen2025Crossspecies/atac_fragments/marmoset/P0041_1content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: P0041_1
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Marmoset/genome/calJac240_pri
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: marmoset
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell CCCAAACCATTGACAT-P0041_1, TGTATCCGTGTTGCTT-P0041_1, CGCTCCATCTTGAGCG-P0041_1, TTAGCAATCGATAACC-P0041_1, GGTCATTAGTGAGCAA-P0041_1 (top 5 of 7799 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
P0041_1.gz 945.81 MB 570f138769c9cfd74f4fa3920db5fb84
P0041_1.gz.tbi 735.68 KB 0fe8c9f88c4412978a8ec3ad26288d4a
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.3 KB 18ebf1c0986ff09faa91e5991cd92fd1
statistics/