Resource

Id summary/johansen2025Crossspecies/atac_fragments/marmoset/P0042_1content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: P0042_1
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Marmoset/genome/calJac240_pri
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: marmoset
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell GGCCATCAGTATTGCA-P0042_1, GCAGGTGAGCAAGGTA-P0042_1, GTAGCGCTCTAATCTC-P0042_1, CATGCATAGGAGGGTT-P0042_1, TGAGGGAGTAGCTGGT-P0042_1 (top 5 of 9170 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
P0042_1.gz 1.73 GB bd43c1ea49ae8e7a865d5a855529dbf7
P0042_1.gz.tbi 988.03 KB e0a99599ca58c3ddc3fd5e3ce154635a
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.3 KB 481b8cdba5fbd516953b00da3c205144
statistics/