Resource

Id summary/johansen2025Crossspecies/atac_fragments/marmoset/P0042_2content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: P0042_2
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Marmoset/genome/calJac240_pri
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: marmoset
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell ATTTGCGCATCCAGGT-P0042_2, CGGACAACAGCTTAGC-P0042_2, GCAGGTGAGGGATGCG-P0042_2, ACGCCACAGTTATTCC-P0042_2, TTGCAACAGCTCGCTT-P0042_2 (top 5 of 8316 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
P0042_2.gz 1.79 GB 4233e66d478876ef343c2a7495cfeabc
P0042_2.gz.tbi 1008.25 KB cd52a07780149a2f5a0f4e9c12977737
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.3 KB 96d0f3d9c9a5ae1dd7cea89b7a5cada5
statistics/