Resource

Id summary/johansen2025Crossspecies/atac_fragments/marmoset/P0043_2content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: P0043_2
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Marmoset/genome/calJac240_pri
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: marmoset
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell TGAGGGAGTGAATCGC-P0043_2, TGTGGCCAGGCGAAAC-P0043_2, ACCATAATCCCTCATA-P0043_2, TACCTCATCTAATCTC-P0043_2, TACGTACAGCACGATT-P0043_2 (top 5 of 11608 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
P0043_2.gz 3.15 GB 6143a442ab17ec041a355a702b4fe43f
P0043_2.gz.tbi 1.26 MB 49805411d1fe9e811b081c1c6c09b4f1
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.3 KB 6a805c5a26deb944e2aeca6882bcfa2e
statistics/