Resource

Id summary/johansen2025Crossspecies/atac_fragments/marmoset/P0044_1content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: P0044_1
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Marmoset/genome/calJac240_pri
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: marmoset
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell GCTCACAAGCTCGCTT-P0044_1, TTGTTGCGTTGCTTCG-P0044_1, CTTCAGGAGCCTAACG-P0044_1, CATAGGCGTCATCATC-P0044_1, TAGTGAGAGCGCCTTT-P0044_1 (top 5 of 9157 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
P0044_1.gz 2.41 GB dbc6625488e6cd9e1e4b353a1b64e79a
P0044_1.gz.tbi 1.12 MB c3bc686759c171a60696f717b8f57d70
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.3 KB 909982ce82bd2a10fe25caf3b77dabfd
statistics/