Resource

Id summary/johansen2025Crossspecies/atac_fragments/marmoset/P0045_1content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: P0045_1
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Marmoset/genome/calJac240_pri
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: marmoset
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell CGAATATGTAGGTTGC-P0045_1, AGCGATTTCTTGGACG-P0045_1, AGTGCCGGTAACAGGG-P0045_1, CCTAATAAGTCATTTC-P0045_1, TGGCCTTTCTTAGCGG-P0045_1 (top 5 of 4270 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
P0045_1.gz 2.39 GB aecb9559c52c3ac5bf7130fb7a2d78c0
P0045_1.gz.tbi 1.09 MB 08187db3f8400e81dd663da6731af355
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.3 KB f9531fe36dd2bfb2aaf8ca8233d944ce
statistics/