Resource

Id summary/johansen2025Crossspecies/atac_fragments/marmoset/P0045_2content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: P0045_2
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Marmoset/genome/calJac240_pri
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: marmoset
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell GACACCGGTGACCTGG-P0045_2, GCCCAAATCTAATTGG-P0045_2, GAGGCTTGTTCCTGTG-P0045_2, ATATGCATCGCAATCG-P0045_2, GTATTGATCGAAGTGA-P0045_2 (top 5 of 6552 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
P0045_2.gz 2.93 GB 4e8e3585fc5e278f21096c233f6c9aef
P0045_2.gz.tbi 1.2 MB b849f585245e06733ed3df0ecc0bbd91
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.3 KB cd7085c9eb0f5ff139a847f85a05ef6e
statistics/