Resource

Id summary/johansen2025Crossspecies/atac_fragments/marmoset/P0046_1content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: P0046_1
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Marmoset/genome/calJac240_pri
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: marmoset
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell GGCCGTTAGGGATGCG-P0046_1, GTGCTCCGTCCTCCAA-P0046_1, GTCTAATCACTTGTTC-P0046_1, TTCGGTACAATCGCAC-P0046_1, TTAACTGAGCCTTAAA-P0046_1 (top 5 of 3622 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
P0046_1.gz 2.12 GB d886c0b0c41ec89a50461c88a75896c8
P0046_1.gz.tbi 1.04 MB 1414cdcb1251f3d4d09c4de3e495741f
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.3 KB 0cd72b9fe85b0e22b8e78dd40688a537
statistics/