Resource

Id summary/johansen2025Crossspecies/atac_fragments/marmoset/P0047_1content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: P0047_1
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Marmoset/genome/calJac240_pri
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: marmoset
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell CTATGATCACTTAACG-P0047_1, TCAAGGAAGTAAGTCC-P0047_1, TTAGGCTAGGGACCTC-P0047_1, CTTGCAACATTAAGTC-P0047_1, TGCCTGTTCACAGGAA-P0047_1 (top 5 of 2193 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
P0047_1.gz 604.2 MB 6e8f591a724aa3c4ef2903c074caa35a
P0047_1.gz.tbi 642.25 KB 54b61018a45fe150726380802aa49fe7
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.3 KB c809c1a4700201534749cc3557908abc
statistics/