Resource

Id summary/johansen2025Crossspecies/atac_fragments/marmoset/P0049_1content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: P0049_1
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Marmoset/genome/calJac240_pri
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: marmoset
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell GGAACCTGTGAGCAAG-P0049_1, CTTTGGGAGCTTCCCG-P0049_1, AGTTATGTCACTTCAT-P0049_1, TTTCTCACAGCAAGGC-P0049_1, GATCGATTCGGTTACG-P0049_1 (top 5 of 18966 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
P0049_1.gz 3.88 GB 71e102fa2b748992504b828df7aa4cc3
P0049_1.gz.tbi 1.41 MB 88033e51ddc01f95abc5e13ad231fc78
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.3 KB 4078809a261fd47be4cf401547b3b51b
statistics/