Resource

Id summary/johansen2025Crossspecies/atac_fragments/marmoset/P0051_1content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: P0051_1
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Marmoset/genome/calJac240_pri
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: marmoset
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell TGAAGTGAGTAGCTTA-P0051_1, ACGAAGTCAAGGGTTG-P0051_1, TGCTTCATCTGTGAGT-P0051_1, CTATTGAAGAGGGACT-P0051_1, AGGACTAAGTGTTGCG-P0051_1 (top 5 of 4192 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
P0051_1.gz 844.4 MB 56c2c1b7e9fd904cfc9841b33e98cae0
P0051_1.gz.tbi 709.03 KB 17577012cb6d3983c11033023b95f7bd
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.3 KB ac0a5bfc8cdf2f52335e21cc5a209ecc
statistics/