Resource

Id summary/johansen2025Crossspecies/atac_fragments/marmoset/P0052_2content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: P0052_2
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Marmoset/genome/calJac240_pri
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: marmoset
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell ATGTAACGTTTCGCGC-P0052_2, CTCCTAATCCAAGTGT-P0052_2, GGAGCATAGTGAACAG-P0052_2, AAGCATGAGGTGTTAC-P0052_2, CGTTTGGAGCCTTAAA-P0052_2 (top 5 of 9623 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
P0052_2.gz 2.69 GB 812832dbbfbf56383b159278c7b6d705
P0052_2.gz.tbi 1.17 MB 61d2d14d9c7497f3785d4721be378fce
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.3 KB 97149509ded3edc36a6194e4d1dd0b44
statistics/