Resource

Id summary/johansen2025Crossspecies/atac_fragments/marmoset/P0053_1content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: P0053_1
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Marmoset/genome/calJac240_pri
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: marmoset
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell GAGAACCAGCGCAATT-P0053_1, ACGACTTAGTAGCCAT-P0053_1, TGAGAACCACTTCACT-P0053_1, GGCTTCAAGTTAACCA-P0053_1, CTCACACTCCTCGATC-P0053_1 (top 5 of 3276 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
P0053_1.gz 1.59 GB a9eca73b8e7893cc807c5aa204242b17
P0053_1.gz.tbi 957.2 KB af02b04b7112cff2ac10a7f59f3585d6
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.3 KB 1fdd47c804a59349080be8fdfccaba0a
statistics/