Resource

Id summary/johansen2025Crossspecies/atac_fragments/marmoset/P0053_2content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: P0053_2
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Marmoset/genome/calJac240_pri
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: marmoset
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell GATGCATTCAGGGCCT-P0053_2, CATCCTCAGAGGAAGG-P0053_2, CAGCTCAAGGAGTCGG-P0053_2, GGGATTAAGTTTGCGG-P0053_2, CAAAGGATCTGCAACG-P0053_2 (top 5 of 2694 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
P0053_2.gz 1.51 GB a27d31ef7f42fbe50eb47b283db2fd81
P0053_2.gz.tbi 940.67 KB f269b89c5d3b2fb8c340e693fbabd803
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.3 KB c419cf9be4679080857d6d92c9522805
statistics/