Resource

Id summary/johansen2025Crossspecies/atac_fragments/marmoset/P0059_1content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: P0059_1
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Marmoset/genome/calJac240_pri
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: marmoset
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell CAAACTGGTAACCTAG-P0059_1, CGCCTCATCATTACGA-P0059_1, AACATTGTCGCGCTAA-P0059_1, ATGCGATTCCAACTGG-P0059_1, GAAGCTAAGGTAAGCA-P0059_1 (top 5 of 2456 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
P0059_1.gz 1.53 GB 310fd06c1bc30ca219246892d5bc54b6
P0059_1.gz.tbi 926.11 KB 03a8d54b795265f0bc7ef4900c66b6cf
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.3 KB 61ade2af34a0d6d03af3c9810df5147a
statistics/