Resource

Id summary/johansen2025Crossspecies/atac_fragments/marmoset/P0059_3content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: P0059_3
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Marmoset/genome/calJac240_pri
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: marmoset
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell CTAACCTGTTTACCGT-P0059_3, ATGAGCCGTATTCGCT-P0059_3, CTCTAAGCACCTACGG-P0059_3, CAAAGCGCAGGTTACC-P0059_3, CACCAACCAATTTGGT-P0059_3 (top 5 of 6782 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
P0059_3.gz 3.95 GB 805eafc08cbdd91c1e65b683dd1b7eac
P0059_3.gz.tbi 1.41 MB ee724d3cb58dcc6f9268558101cb5173
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.3 KB 21c969495d83fdaa61b36eef24391da7
statistics/