Resource

Id summary/johansen2025Crossspecies/atac_fragments/marmoset/P0059_4content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: P0059_4
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Marmoset/genome/calJac240_pri
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: marmoset
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell GTAAGCAAGGTTACAC-P0059_4, TTTGCGGAGTATTGCA-P0059_4, ACATTGCAGCTAAGTC-P0059_4, CGAACCGGTCCGCTGT-P0059_4, CGGGACAAGCTATTGA-P0059_4 (top 5 of 6232 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
P0059_4.gz 3.91 GB 1e739f7340e277a2a696efad9926f883
P0059_4.gz.tbi 1.39 MB b5011011dfb5cdd9694483b33d6eff13
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.3 KB 1c724e2cb6bd895121738f050ed9e757
statistics/