Resource

Id summary/johansen2025Crossspecies/atac_fragments/marmoset/P0060_1content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: P0060_1
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Marmoset/genome/calJac240_pri
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: marmoset
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell TTTAACGAGCTGGCTA-P0060_1, AGAATCGAGGAGGGTT-P0060_1, ACTCGCTTCGATAACC-P0060_1, AGTCAGGCAAATGCCC-P0060_1, GGTTTGTAGATTGAGG-P0060_1 (top 5 of 6016 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
P0060_1.gz 2.18 GB 1c9c5510010e3d0cdf87ab180aa1cd90
P0060_1.gz.tbi 1.06 MB bdea1063b490ab1a6073f570dec3591b
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.3 KB 22a3a2ef2886bd4d3c9f2e0680a8dde5
statistics/