Resource

Id summary/johansen2025Crossspecies/atac_fragments/marmoset/P0060_2.h5adcontent_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: P0060_2.h5ad
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Marmoset/genome/calJac240_pri
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: marmoset
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell TGGATTGGTGTTTCAC-P0060_2, TTCATTCAGCCACATG-P0060_2, TCTATGTTCTAACCAA-P0060_2, CCTTCGTAGGAACCAA-P0060_2, GCTTTACGTTGCTGGG-P0060_2 (top 5 of 662 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
P0060_2.h5ad.gz 206.44 MB 487a811bd4d8332b8f75debede890e9e
P0060_2.h5ad.gz.tbi 563.81 KB 748983f5c8f0f1b2c86178ca3997f005
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.32 KB bf8e89e07e185646d98a42f12d9ba629
statistics/