Resource

Id summary/johansen2025Crossspecies/atac_fragments/marmoset/P0060_3content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: P0060_3
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Marmoset/genome/calJac240_pri
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: marmoset
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell GTACTTCGTACGTTTC-P0060_3, GATAGACCATGCATAT-P0060_3, TAGCATATCATGAAGG-P0060_3, GTCCGTAAGTTTGCGG-P0060_3, GTCGAGGAGTAGGCGG-P0060_3 (top 5 of 6221 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
P0060_3.gz 2.48 GB 4a23c2043643a676ea9f441fe4e9ad4c
P0060_3.gz.tbi 1.14 MB 22926d6ce98f6d390b00c5f24ed5a1fc
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.3 KB 5a95f33ae82059f4d38ef40a187d3422
statistics/