Resource

Id summary/johansen2025Crossspecies/atac_fragments/marmoset/P0060_4content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: P0060_4
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Marmoset/genome/calJac240_pri
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: marmoset
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell ATTCATGAGCGATACT-P0060_4, GTGCTGGGTGCGCAAT-P0060_4, AACCTTAAGAATCGCT-P0060_4, TTTATGGAGCTCAATA-P0060_4, CAAAGTGAGGGCTTTG-P0060_4 (top 5 of 7913 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
P0060_4.gz 2.91 GB bd6d9e4138d444e669befff077d080a9
P0060_4.gz.tbi 1.24 MB d3f9b4b5459ab37bc688ee0730297674
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.3 KB c764b69d6307c70a9701c69bc09691cc
statistics/