Resource

Id summary/johansen2025Crossspecies/atac_fragments/marmoset/P0061_1content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: P0061_1
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Marmoset/genome/calJac240_pri
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: marmoset
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell GCGGGTTTCTGTGAGT-P0061_1, CGGTGAACAGGAATCG-P0061_1, TTTCGTCCAGGCAAGC-P0061_1, AAACCGGCATGGAGGC-P0061_1, TGTGCGCAGCACCACA-P0061_1 (top 5 of 4951 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
P0061_1.gz 2.4 GB 00ffdd6b0f669c4107752679d231ca7a
P0061_1.gz.tbi 1.12 MB fcafce8c8b87997b046d10fd0e44bc5d
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.3 KB 14c13e99bc9c0188c72f922b20dda4a2
statistics/