Resource

Id summary/johansen2025Crossspecies/atac_fragments/marmoset/P0062_1content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: P0062_1
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Marmoset/genome/calJac240_pri
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: marmoset
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell AAGGATCCAAAGGCCA-P0062_1, GTGGATGCAATTGAAG-P0062_1, GGAGGTTAGGTGTTAC-P0062_1, GCTGTGCAGTTCCTGC-P0062_1, GAACCAAAGCGGCTGT-P0062_1 (top 5 of 1709 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
P0062_1.gz 1.4 GB c1974644bf685b1f97fd9fae32daf1e1
P0062_1.gz.tbi 894.3 KB e5f6f5f6b3a73ba1d86c98bba7d4f326
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.3 KB ff08bbd0aeeddedaaa02dda8d5d3cfba
statistics/