Resource

Id summary/johansen2025Crossspecies/atac_fragments/marmoset/P0064_1content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: P0064_1
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Marmoset/genome/calJac240_pri
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: marmoset
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell AACTTAGTCCTCAGCT-P0064_1, CAATGTGGTTAGACCA-P0064_1, TACTAAGTCCTCAGTC-P0064_1, CCTATATTCATTGTTC-P0064_1, TTTGTCTAGTTAGTGC-P0064_1 (top 5 of 4546 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
P0064_1.gz 2.59 GB bb508806a9db7c50ec1d213d69ea3811
P0064_1.gz.tbi 1.17 MB 1028af4bf5425ce73809da41b892ed14
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.3 KB f77a0c92541252d35db1a748618dc1c9
statistics/